STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAur_0332Putative transcriptional regulator, IclR family; Identified by match to protein family HMM PF01614. (274 aa)    
Predicted Functional Partners:
AAur_3579
Putative transcriptional regulator, IclR family; Identified by match to protein family HMM PF01614.
  
     0.772
AAur_4088
Putative transcriptional regulator, IclR family; Identified by match to protein family HMM PF01614.
  
     0.772
AAur_4157
Putative transcriptional regulator, IclR family; Identified by match to protein family HMM PF01614.
  
     0.771
AAur_3821
Putative transcriptional regulator, IclR family; Identified by match to protein family HMM PF01614.
  
     0.766
AAur_3980
Putative transcriptional regulator, IclR family; Identified by match to protein family HMM PF01614.
  
     0.763
gtdA
Gentisate 1,2-dioxygenase; Identified by match to protein family HMM PF07883.
 
     0.708
AAur_0329
Conserved hypothetical protein; Identified by match to protein family HMM TIGR03083.
 
     0.704
uca
Urea carboxylase; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02626; match to protein family HMM PF02682; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00724; match to protein family HMM TIGR02712.
  
    0.691
AAur_0333
Putative benzoate MFS transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
     0.682
AAur_0334
Putative aromatic-ring hydroxylase (monooxygenase); Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF03486.
 
   
 0.678
Your Current Organism:
Paenarthrobacter aurescens
NCBI taxonomy Id: 290340
Other names: Arthrobacter aurescens TC1, P. aurescens TC1, Paenarthrobacter aurescens TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.