STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAur_0729Putative signal transduction histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. (471 aa)    
Predicted Functional Partners:
AAur_0730
Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 
 0.968
AAur_0728
Putative TRAP transporter solute receptor, TAXI family; Identified by match to protein family HMM TIGR02122.
 
     0.906
AAur_3233
Putative signal transduction histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
 
 0.864
AAur_0727
Kinase, pfkB family; Identified by match to protein family HMM PF00294.
       0.774
AAur_1575
Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 
 0.692
AAur_3513
Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.
 
 
 0.684
AAur_0895
Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 
 0.657
mtrA
DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 
 0.625
kdpE
KDP operon transcriptional regulatory; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 
 0.608
AAur_3234
Response regulator/GGDEF domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
 
 
 0.604
Your Current Organism:
Paenarthrobacter aurescens
NCBI taxonomy Id: 290340
Other names: Arthrobacter aurescens TC1, P. aurescens TC1, Paenarthrobacter aurescens TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.