STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAur_1267Putative subtilase family domain protein; Identified by match to protein family HMM PF00082; Belongs to the peptidase S8 family. (468 aa)    
Predicted Functional Partners:
AAur_1266
Putative exopolyphosphatase (ppx); Identified by match to protein family HMM PF02541.
     
 0.852
AAur_1264
Conserved hypothetical protein; Identified by match to protein family HMM PF04977.
  
    0.837
AAur_1265
Putative protein of unknown function (DUF501); Identified by match to protein family HMM PF04417.
       0.811
AAur_1268
Putative NADH dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
 
    0.745
AAur_3739
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.590
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
     
 0.545
AAur_1837
Putative integral membrane protein.
  
     0.541
AAur_3142
Putative S-layer homology domain protein; Identified by match to protein family HMM PF00395; match to protein family HMM PF00415.
   
 
 0.465
AAur_3144
Putative S-layer domain protein; Identified by match to protein family HMM PF00395; match to protein family HMM PF00415.
   
 
 0.465
AAur_1269
Identified by match to protein family HMM PF00583.
       0.443
Your Current Organism:
Paenarthrobacter aurescens
NCBI taxonomy Id: 290340
Other names: Arthrobacter aurescens TC1, P. aurescens TC1, Paenarthrobacter aurescens TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.