STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAur_1429Putative protein phosphatase; Identified by match to protein family HMM PF00481. (308 aa)    
Predicted Functional Partners:
AAur_1431
Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069.
 
 
 0.979
AAur_0028
Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793.
 
 
 0.963
AAur_0029
Putative serine/threonine kinase domain protein; Identified by match to protein family HMM PF00069.
 
 
 0.962
AAur_1694
Putative Serine/threonine-protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793.
 
 0.962
AAur_3950
Putative serine/threonine protein kinase domain protein; Identified by match to protein family HMM PF00069.
 
 
 0.888
AAur_1430
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.856
AAur_1427
Putative protease, transglutaminase-like; Identified by match to protein family HMM PF01841.
 
     0.850
AAur_3993
Putative protein kinase domain protein; Identified by match to protein family HMM PF00069.
 
 
 0.850
AAur_1749
Putative protein kinase domain protein; Identified by match to protein family HMM PF00069.
 
 
 0.846
AAur_1426
Putative Protein of unknown function DUF58; Identified by match to protein family HMM PF01882.
  
    0.840
Your Current Organism:
Paenarthrobacter aurescens
NCBI taxonomy Id: 290340
Other names: Arthrobacter aurescens TC1, P. aurescens TC1, Paenarthrobacter aurescens TC1
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