STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAur_1957Putative ABC-type oligopeptide transport system, ATPase component; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (364 aa)    
Predicted Functional Partners:
AAur_1955
Putative ABC-type dipeptide/oligopeptide transport systems, permease components; Identified by match to protein family HMM PF00528.
  
 0.990
AAur_1954
Putative ABC-type dipeptide/oligopeptide transport system, permease component; Identified by match to protein family HMM PF00528.
  
 0.958
AAur_1971
Putative ABC-type dipeptide/oligopeptide transport systems, permease components; Identified by match to protein family HMM PF00528.
  
 0.916
AAur_1956
Putative oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
 
  
0.908
AAur_3436
Putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component; Identified by match to protein family HMM PF00528.
  
 0.869
AAur_1953
Putative ABC-type dipeptide transport system; Identified by match to protein family HMM PF00496.
 
  
 0.866
AAur_0814
Putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Identified by match to protein family HMM PF00528.
  
 0.835
AAur_3877
Putative ABC-type dipeptide/oligopeptide transport system, permease component; Identified by match to protein family HMM PF00528.
  
 0.826
AAur_0828
Putative ABC-type dipeptide/oligopeptide transport systems, permease components; Identified by match to protein family HMM PF00528.
  
 0.818
AAur_1970
Putative ABC-type dipeptide/oligopeptide transport systems, permease components; Identified by match to protein family HMM PF00528.
  
 0.818
Your Current Organism:
Paenarthrobacter aurescens
NCBI taxonomy Id: 290340
Other names: Arthrobacter aurescens TC1, P. aurescens TC1, Paenarthrobacter aurescens TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.