STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAur_2016Putative ABC-type Fe3+ transport system; Identified by match to protein family HMM PF01497. (326 aa)    
Predicted Functional Partners:
AAur_2017
ABC-type Fe3+-siderophore transport system, permease component; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.997
AAur_2015
Putative enterobactin-iron ABC transport system, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.994
fepC-2
Ferric enterobactin transport ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF02463.
 
 
 0.860
fepC
Ferric enterobactin transport ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.859
AAur_3763
Putative enterobactin-iron transport system, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.838
fepD
Ferric enterobactin transport system permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.825
fepD-2
Ferric enterobactin transport protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.817
AAur_3765
Putative ABC-type Fe3+ transport system, permease component; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.812
AAur_2018
Hypothetical protein; Identified by Glimmer2; putative.
       0.514
fepG
Ferric enterobactin transport system, permease component; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.470
Your Current Organism:
Paenarthrobacter aurescens
NCBI taxonomy Id: 290340
Other names: Arthrobacter aurescens TC1, P. aurescens TC1, Paenarthrobacter aurescens TC1
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