STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAur_2392Identified by match to protein family HMM PF01152. (160 aa)    
Predicted Functional Partners:
AAur_2390
Putative OsmC-like protein; Identified by match to protein family HMM PF02566.
      0.905
AAur_2391
Conserved hypothetical protein; Identified by match to protein family HMM PF00924.
     
 0.844
AAur_2389
Putative NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.
       0.557
AAur_0833
Putative flavohemoprotein; Identified by match to protein family HMM PF00042; match to protein family HMM PF00175; match to protein family HMM PF00970; Belongs to the globin family.
  
  
 0.550
AAur_3286
Putative cytochrome C assembly protein; Identified by match to protein family HMM PF01578.
 
     0.478
AAur_0689
Putative DSBA-like thioredoxin domain protein; Identified by match to protein family HMM PF01323.
  
  
 0.443
AAur_2379
Putative DSBA-like thioredoxin domain protein; Identified by match to protein family HMM PF01323.
  
  
 0.443
AAur_0917
Identified by match to protein family HMM PF00128.
      0.416
Your Current Organism:
Paenarthrobacter aurescens
NCBI taxonomy Id: 290340
Other names: Arthrobacter aurescens TC1, P. aurescens TC1, Paenarthrobacter aurescens TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.