Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AAur_3130 | AAur_3131 | Conserved hypothetical protein. | Putative polysaccharide pyruvyl transferase family protein; Identified by match to protein family HMM PF04230. | 0.415 |
AAur_3130 | AAur_3132 | Conserved hypothetical protein. | Putative S-layer domain protein; Identified by match to protein family HMM PF00395; match to protein family HMM PF07676. | 0.491 |
AAur_3131 | AAur_3130 | Putative polysaccharide pyruvyl transferase family protein; Identified by match to protein family HMM PF04230. | Conserved hypothetical protein. | 0.415 |
AAur_3131 | AAur_3132 | Putative polysaccharide pyruvyl transferase family protein; Identified by match to protein family HMM PF04230. | Putative S-layer domain protein; Identified by match to protein family HMM PF00395; match to protein family HMM PF07676. | 0.778 |
AAur_3131 | AAur_3133 | Putative polysaccharide pyruvyl transferase family protein; Identified by match to protein family HMM PF04230. | Hypothetical protein; Identified by Glimmer2; putative. | 0.556 |
AAur_3131 | AAur_3214 | Putative polysaccharide pyruvyl transferase family protein; Identified by match to protein family HMM PF04230. | Putative S-layer domain protein; Identified by match to protein family HMM PF00395. | 0.499 |
AAur_3131 | AAur_3248 | Putative polysaccharide pyruvyl transferase family protein; Identified by match to protein family HMM PF04230. | Glycosyl transferase domain, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.420 |
AAur_3131 | AAur_4125 | Putative polysaccharide pyruvyl transferase family protein; Identified by match to protein family HMM PF04230. | Putative glucosyltransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025. | 0.617 |
AAur_3132 | AAur_3130 | Putative S-layer domain protein; Identified by match to protein family HMM PF00395; match to protein family HMM PF07676. | Conserved hypothetical protein. | 0.491 |
AAur_3132 | AAur_3131 | Putative S-layer domain protein; Identified by match to protein family HMM PF00395; match to protein family HMM PF07676. | Putative polysaccharide pyruvyl transferase family protein; Identified by match to protein family HMM PF04230. | 0.778 |
AAur_3132 | AAur_3133 | Putative S-layer domain protein; Identified by match to protein family HMM PF00395; match to protein family HMM PF07676. | Hypothetical protein; Identified by Glimmer2; putative. | 0.556 |
AAur_3133 | AAur_3131 | Hypothetical protein; Identified by Glimmer2; putative. | Putative polysaccharide pyruvyl transferase family protein; Identified by match to protein family HMM PF04230. | 0.556 |
AAur_3133 | AAur_3132 | Hypothetical protein; Identified by Glimmer2; putative. | Putative S-layer domain protein; Identified by match to protein family HMM PF00395; match to protein family HMM PF07676. | 0.556 |
AAur_3214 | AAur_3131 | Putative S-layer domain protein; Identified by match to protein family HMM PF00395. | Putative polysaccharide pyruvyl transferase family protein; Identified by match to protein family HMM PF04230. | 0.499 |
AAur_3248 | AAur_3131 | Glycosyl transferase domain, group 2 family protein; Identified by match to protein family HMM PF00535. | Putative polysaccharide pyruvyl transferase family protein; Identified by match to protein family HMM PF04230. | 0.420 |
AAur_3248 | AAur_4125 | Glycosyl transferase domain, group 2 family protein; Identified by match to protein family HMM PF00535. | Putative glucosyltransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025. | 0.636 |
AAur_4125 | AAur_3131 | Putative glucosyltransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025. | Putative polysaccharide pyruvyl transferase family protein; Identified by match to protein family HMM PF04230. | 0.617 |
AAur_4125 | AAur_3248 | Putative glucosyltransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025. | Glycosyl transferase domain, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.636 |