STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_0296tRNA-(MS(2)IO(6)A)-hydroxylase-like protein. (197 aa)    
Predicted Functional Partners:
gluQ
Glutamate--tRNA ligase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.
       0.777
Adeh_0297
Periplasmic sensor hybrid histidine kinase.
       0.773
Adeh_0294
4-alpha-glucanotransferase.
       0.534
Adeh_0293
Maltooligosyl trehalose synthase.
       0.462
Adeh_3747
Outer membrane protein, OmpA/MotB family.
  
     0.462
Adeh_0292
Putative phosphohistidine phosphatase, SixA.
       0.451
Adeh_3645
Outer membrane protein, OmpA/MotB family.
  
     0.422
Adeh_1021
Linoleoyl-CoA desaturase.
  
     0.419
Adeh_0290
Conserved hypothetical protein.
       0.409
Adeh_0291
AAA ATPase.
       0.409
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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