STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_0484TonB-dependent receptor. (702 aa)    
Predicted Functional Partners:
Adeh_0269
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
  
 
 0.829
Adeh_0660
Cell division and transport-associated protein TolA; TC 2.C.1.2.1.
  
 
 0.829
Adeh_0853
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.829
Adeh_1239
TonB-like protein.
  
 
 0.829
Adeh_1545
Hypothetical protein.
  
 
 0.829
Adeh_0608
Hypothetical protein.
    
 
 0.783
Adeh_1877
Hypothetical protein.
    
 
 0.783
Adeh_2900
Conserved hypothetical protein.
    
 
 0.783
Adeh_3933
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
     0.644
Adeh_3466
ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit.
  
  
 0.636
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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