STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_0632Tetratricopeptide protein. (566 aa)    
Predicted Functional Partners:
Adeh_0633
Conserved hypothetical protein.
  
    0.773
Adeh_0634
Hypothetical protein.
       0.768
Adeh_3321
Tetratricopeptide repeat protein.
 
     0.617
Adeh_1956
Tetratricopeptide repeat protein.
 
     0.611
Adeh_3450
Serine/threonine protein kinase with WD40 repeats.
 
 0.606
Adeh_0635
Fimbrial protein pilin.
       0.580
Adeh_1301
Tetratricopeptide repeat protein.
 
     0.557
Adeh_2822
Tetratricopeptide repeat protein.
  
     0.525
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.518
Adeh_2929
UBA/THIF-type NAD/FAD binding protein.
  
 0.513
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.