STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_0635Fimbrial protein pilin. (236 aa)    
Predicted Functional Partners:
Adeh_0692
Conserved hypothetical protein.
  
  
 
0.910
Adeh_0645
Type II and III secretion system protein, secretin.
 
   
 0.849
Adeh_0641
Type IV pilus assembly protein PilM.
 
   
 0.846
Adeh_0642
Fimbrial assembly.
 
   
 0.837
Adeh_0643
Type IV pilus biogenesis protein PilO.
 
   
 0.829
Adeh_0637
Type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.797
Adeh_2701
Peptidoglycan-binding LysM.
  
     0.742
Adeh_0633
Conserved hypothetical protein.
 
     0.705
Adeh_0678
Fimbrial assembly protein.
 
   
 0.701
Adeh_0623
Twitching motility protein.
 
   
 0.669
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.