STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_0643Type IV pilus biogenesis protein PilO. (209 aa)    
Predicted Functional Partners:
Adeh_0642
Fimbrial assembly.
 
 
 0.998
Adeh_0641
Type IV pilus assembly protein PilM.
 
 
 0.994
Adeh_0645
Type II and III secretion system protein, secretin.
 
 
 0.993
Adeh_0644
Hypothetical protein.
 
  
 0.987
Adeh_2701
Peptidoglycan-binding LysM.
 
   0.942
Adeh_0678
Fimbrial assembly protein.
 
 
 0.884
Adeh_0624
Type II secretion system protein.
 
 
 
 0.866
Adeh_0635
Fimbrial protein pilin.
 
   
 0.817
Adeh_0622
Type II secretion system protein E.
  
 
 0.793
Adeh_0627
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein.
 
  
 0.775
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.