STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_0652General secretion pathway protein-related protein. (305 aa)    
Predicted Functional Partners:
Adeh_0651
Tetratricopeptide repeat protein.
 
     0.810
Adeh_2649
Lipopolysaccharide biosynthesis.
 
     0.735
Adeh_0653
Protein of unknown function DUF490.
 
   
 0.727
Adeh_0654
Surface antigen (D15).
     
 0.633
Adeh_0642
Fimbrial assembly.
 
     0.622
Adeh_0634
Hypothetical protein.
 
     0.489
Adeh_2767
Polysaccharide export protein.
 
     0.464
Adeh_0643
Type IV pilus biogenesis protein PilO.
 
     0.460
Adeh_0454
Conserved hypothetical protein.
  
     0.456
Adeh_3955
CheW protein.
  
     0.432
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.