STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_0769Diguanylate phosphodiesterase (EAL domain). (261 aa)    
Predicted Functional Partners:
Adeh_2704
Diguanylate cyclase with GAF sensor.
 
  
 0.914
Adeh_0132
Diguanylate cyclase (GGDEF domain).
 
  
 0.883
Adeh_0429
Diguanylate cyclase (GGDEF domain).
 
  
 0.880
Adeh_4011
Diguanylate cyclase (GGDEF domain).
 
  
 0.879
Adeh_1576
Diguanylate cyclase with GAF sensor.
 
  
 0.873
Adeh_3791
DNA-binding protein Fis.
    
 
 0.848
Adeh_0286
Response regulator receiver modulated diguanylate cyclase.
 
  
 0.808
Adeh_0705
Type III secretion system apparatus protein YscQ/HrcQ.
  
  
 0.771
Adeh_1118
Metal dependent phosphohydrolase.
 
  
 0.763
Adeh_1136
Response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase.
 
  
 0.737
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.