STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_0858FMN-binding pyridoxamine 5'-phosphate oxidase-related protein protein. (171 aa)    
Predicted Functional Partners:
Adeh_3464
Periplasmic binding protein.
  
    0.771
Adeh_0287
ABC-type Fe3+ transporter, periplasmic ligand binding protein.
   
    0.752
Adeh_0218
Pyruvate-ferredoxin (flavodoxin) oxidoreductase.
    
   0.610
Adeh_4030
ABC transporter, periplasmic ligand binding protein.
  
    0.610
Adeh_0484
TonB-dependent receptor.
  
  
 0.586
Adeh_3466
ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit.
  
  
 0.547
Adeh_0857
Two component transcriptional regulator, LuxR family.
       0.517
pdxJ
Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
     
  0.499
Adeh_0817
Glutamate synthase (NADH) large subunit.
     
 0.466
Adeh_3951
Thioredoxin reductase.
  
    0.459
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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