Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Adeh_0899ABC transporter, inner membrane subunit. (287 aa)    
Predicted Functional Partners:
Adeh_0900
ABC transporter, ATPase subunit.
  
 0.968
Adeh_0898
Protein of unknown function DUF420.
 
     0.818
Adeh_3916
ABC transporter, inner membrane subunit.
  
  
  0.780
Adeh_3915
Daunorubicin resistance ABC transporter ATP-binding subunit.
  
 0.779
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
       0.733
Adeh_0835
ABC transporter, ATPase subunit.
 
  
 0.699
Adeh_0836
ABC transporter, inner membrane subunit.
  
  
  0.663
Adeh_1768
ABC transporter, ATPase subunit.
 
  
 0.509
Adeh_0779
Conserved hypothetical protein.
  
  
 0.500
Adeh_2215
Nitroreductase.
  
  
 0.500
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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