STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_0940Cytochrome bd quinol oxidase subunit 2 apoprotein. (338 aa)    
Predicted Functional Partners:
Adeh_0939
Cytochrome bd quinol oxidase subunit 1 apoprotein.
 
 0.997
Adeh_3730
Cytochrome bd quinol oxidase subunit 1 apoprotein.
 
 0.986
Adeh_3731
Cytochrome bd quinol oxidase subunit 2 apoprotein.
  
  
 
0.927
Adeh_2637
Succinate dehydrogenase subunit A.
     
 0.542
Adeh_2933
Succinate dehydrogenase subunit A.
     
 0.542
Adeh_2638
Succinate dehydrogenase subunit B.
     
 0.539
Adeh_2932
Succinate dehydrogenase subunit B.
     
 0.539
nuoD2
NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
     
 0.530
Adeh_2636
Succinate dehydrogenase subunit C.
     
  0.499
Adeh_2934
Succinate dehydrogenase subunit C.
     
  0.499
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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