STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_0992Putative vgr-related protein. (979 aa)    
Predicted Functional Partners:
Adeh_0991
Hypothetical protein.
 
   
0.600
Adeh_2104
Hypothetical protein.
  
     0.578
Adeh_1956
Tetratricopeptide repeat protein.
 
    0.572
Adeh_1141
Endothelin-converting enzyme, Metallo peptidase, MEROPS family M13.
 
    0.550
Adeh_4028
Conserved hypothetical protein.
 
     0.534
Adeh_2125
Kelch repeat protein.
 
 
 0.501
Adeh_4050
Glycosyl transferase, family 25.
  
     0.490
Adeh_0943
Protein of unknown function DUF255.
  
 
 
 0.463
Adeh_3989
Major facilitator superfamily transporter.
  
     0.462
Adeh_1548
Hypothetical protein.
  
     0.461
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.