STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_1266Tetratricopeptide repeat protein. (307 aa)    
Predicted Functional Partners:
Adeh_1956
Tetratricopeptide repeat protein.
 
     0.748
Adeh_3321
Tetratricopeptide repeat protein.
 
     0.747
Adeh_0425
Zinc finger/thioredoxin putative.
 
     0.737
Adeh_3333
Tetratricopeptide repeat protein.
 
     0.731
Adeh_2822
Tetratricopeptide repeat protein.
  
     0.718
Adeh_1301
Tetratricopeptide repeat protein.
 
     0.690
Adeh_0137
Hypothetical protein.
  
     0.686
Adeh_3076
Tetratricopeptide repeat protein.
  
     0.671
Adeh_3415
Tetratricopeptide repeat protein.
 
     0.664
Adeh_3075
Tetratricopeptide repeat protein.
  
     0.652
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.