Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Adeh_0613 | Adeh_1193 | Adeh_0613 | Adeh_1193 | CheA signal transduction histidine kinase. | CheA signal transduction histidine kinase. | 0.991 |
Adeh_0613 | Adeh_1376 | Adeh_0613 | Adeh_1376 | CheA signal transduction histidine kinase. | Methyl-accepting chemotaxis sensory transducer. | 0.781 |
Adeh_0613 | Adeh_1378 | Adeh_0613 | Adeh_1378 | CheA signal transduction histidine kinase. | Response regulator receiver domain protein (CheY-like). | 0.493 |
Adeh_0613 | Adeh_1379 | Adeh_0613 | Adeh_1379 | CheA signal transduction histidine kinase. | CheA signal transduction histidine kinase. | 0.594 |
Adeh_0613 | Adeh_1380 | Adeh_0613 | Adeh_1380 | CheA signal transduction histidine kinase. | Methyl-accepting chemotaxis sensory transducer. | 0.848 |
Adeh_0613 | Adeh_1381 | Adeh_0613 | Adeh_1381 | CheA signal transduction histidine kinase. | CheW protein. | 0.933 |
Adeh_0613 | Adeh_3183 | Adeh_0613 | Adeh_3183 | CheA signal transduction histidine kinase. | Signal transduction histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.984 |
Adeh_0613 | cheB5 | Adeh_0613 | Adeh_1383 | CheA signal transduction histidine kinase. | Response regulator receiver (CheY-like) modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.888 |
Adeh_1193 | Adeh_0613 | Adeh_1193 | Adeh_0613 | CheA signal transduction histidine kinase. | CheA signal transduction histidine kinase. | 0.991 |
Adeh_1193 | Adeh_1376 | Adeh_1193 | Adeh_1376 | CheA signal transduction histidine kinase. | Methyl-accepting chemotaxis sensory transducer. | 0.781 |
Adeh_1193 | Adeh_1378 | Adeh_1193 | Adeh_1378 | CheA signal transduction histidine kinase. | Response regulator receiver domain protein (CheY-like). | 0.493 |
Adeh_1193 | Adeh_1379 | Adeh_1193 | Adeh_1379 | CheA signal transduction histidine kinase. | CheA signal transduction histidine kinase. | 0.596 |
Adeh_1193 | Adeh_1380 | Adeh_1193 | Adeh_1380 | CheA signal transduction histidine kinase. | Methyl-accepting chemotaxis sensory transducer. | 0.838 |
Adeh_1193 | Adeh_1381 | Adeh_1193 | Adeh_1381 | CheA signal transduction histidine kinase. | CheW protein. | 0.928 |
Adeh_1193 | Adeh_3183 | Adeh_1193 | Adeh_3183 | CheA signal transduction histidine kinase. | Signal transduction histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.984 |
Adeh_1193 | cheB5 | Adeh_1193 | Adeh_1383 | CheA signal transduction histidine kinase. | Response regulator receiver (CheY-like) modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.884 |
Adeh_1376 | Adeh_0613 | Adeh_1376 | Adeh_0613 | Methyl-accepting chemotaxis sensory transducer. | CheA signal transduction histidine kinase. | 0.781 |
Adeh_1376 | Adeh_1193 | Adeh_1376 | Adeh_1193 | Methyl-accepting chemotaxis sensory transducer. | CheA signal transduction histidine kinase. | 0.781 |
Adeh_1376 | Adeh_1377 | Adeh_1376 | Adeh_1377 | Methyl-accepting chemotaxis sensory transducer. | Anti-sigma-factor antagonist (STAS) domain protein. | 0.723 |
Adeh_1376 | Adeh_1378 | Adeh_1376 | Adeh_1378 | Methyl-accepting chemotaxis sensory transducer. | Response regulator receiver domain protein (CheY-like). | 0.805 |
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