STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_1829Response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase. (357 aa)    
Predicted Functional Partners:
Adeh_2704
Diguanylate cyclase with GAF sensor.
  
 0.976
Adeh_3473
Response regulator receiver modulated diguanylate cyclase.
  
 0.974
Adeh_4011
Diguanylate cyclase (GGDEF domain).
  
 0.952
Adeh_0132
Diguanylate cyclase (GGDEF domain).
  
 0.951
Adeh_1556
Response regulator receiver modulated diguanylate cyclase.
  
0.950
Adeh_1576
Diguanylate cyclase with GAF sensor.
  
 0.874
Adeh_2393
Response regulator receiver modulated diguanylate cyclase.
  
0.822
Adeh_0705
Type III secretion system apparatus protein YscQ/HrcQ.
  
    0.806
Adeh_0429
Diguanylate cyclase (GGDEF domain).
  
 0.794
Adeh_4312
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.729
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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