Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_1900Hypothetical protein. (506 aa)    
Predicted Functional Partners:
Adeh_4027
Hypothetical protein.
  
     0.625
Adeh_1899
Hypothetical protein.
       0.578
Adeh_1897
ABC transporter, ATPase subunit.
       0.570
Adeh_1898
Methyltransferase type 11.
       0.570
Adeh_2054
AsmA.
  
     0.566
Adeh_2026
Hypothetical protein.
 
 
   0.541
Adeh_2621
Hypothetical protein.
  
     0.534
Adeh_1091
Heat shock protein DnaJ-like protein; With TPR repeats.
 
     0.499
Adeh_3317
Spore coat assembly protein-like protein.
  
     0.489
Adeh_2832
Acyltransferase 3.
 
     0.485
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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