Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Adeh_0218 | Adeh_1952 | Adeh_0218 | Adeh_1952 | Pyruvate-ferredoxin (flavodoxin) oxidoreductase. | Manganese and iron superoxide dismutase. | 0.869 |
Adeh_0218 | Adeh_3665 | Adeh_0218 | Adeh_3665 | Pyruvate-ferredoxin (flavodoxin) oxidoreductase. | Aconitase. | 0.776 |
Adeh_1952 | Adeh_0218 | Adeh_1952 | Adeh_0218 | Manganese and iron superoxide dismutase. | Pyruvate-ferredoxin (flavodoxin) oxidoreductase. | 0.869 |
Adeh_1952 | Adeh_3665 | Adeh_1952 | Adeh_3665 | Manganese and iron superoxide dismutase. | Aconitase. | 0.888 |
Adeh_1952 | rplM | Adeh_1952 | Adeh_3372 | Manganese and iron superoxide dismutase. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.867 |
Adeh_1952 | rplN | Adeh_1952 | Adeh_1936 | Manganese and iron superoxide dismutase. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.867 |
Adeh_1952 | rplO | Adeh_1952 | Adeh_1927 | Manganese and iron superoxide dismutase. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.877 |
Adeh_1952 | rplQ | Adeh_1952 | Adeh_1918 | Manganese and iron superoxide dismutase. | LSU ribosomal protein L17P. | 0.871 |
Adeh_1952 | rplS | Adeh_1952 | Adeh_1912 | Manganese and iron superoxide dismutase. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.869 |
Adeh_1952 | rpsE | Adeh_1952 | Adeh_1929 | Manganese and iron superoxide dismutase. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.866 |
Adeh_1952 | rpsK | Adeh_1952 | Adeh_1921 | Manganese and iron superoxide dismutase. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.867 |
Adeh_1952 | rpsL | Adeh_1952 | Adeh_1950 | Manganese and iron superoxide dismutase. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.873 |
Adeh_3665 | Adeh_0218 | Adeh_3665 | Adeh_0218 | Aconitase. | Pyruvate-ferredoxin (flavodoxin) oxidoreductase. | 0.776 |
Adeh_3665 | Adeh_1952 | Adeh_3665 | Adeh_1952 | Aconitase. | Manganese and iron superoxide dismutase. | 0.888 |
Adeh_3665 | rplM | Adeh_3665 | Adeh_3372 | Aconitase. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.772 |
Adeh_3665 | rplN | Adeh_3665 | Adeh_1936 | Aconitase. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.801 |
Adeh_3665 | rplO | Adeh_3665 | Adeh_1927 | Aconitase. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.795 |
Adeh_3665 | rplQ | Adeh_3665 | Adeh_1918 | Aconitase. | LSU ribosomal protein L17P. | 0.815 |
Adeh_3665 | rplS | Adeh_3665 | Adeh_1912 | Aconitase. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.842 |
Adeh_3665 | rpsE | Adeh_3665 | Adeh_1929 | Aconitase. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.817 |
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