Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Adeh_1992Two component, sigma54 specific, transcriptional regulator, Fis family. (460 aa)    
Predicted Functional Partners:
Adeh_1993
Signal transduction histidine kinase, nitrogen specific, NtrB.
 
 
 0.949
Adeh_3183
Signal transduction histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.793
Adeh_4167
RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.672
Adeh_0705
Type III secretion system apparatus protein YscQ/HrcQ.
  
  
 0.642
Adeh_0892
Osmosensitive K+ channel signal transduction histidine kinase.
    
 
 0.628
Adeh_2444
Histidine kinase.
    
 
 0.628
Adeh_3134
Response regulator receiver domain protein (CheY-like).
    
 
 0.626
Adeh_3180
GAF sensor signal transduction histidine kinase.
    
 
 0.626
Adeh_1473
PAS/PAC sensor signal transduction histidine kinase.
      
 0.618
Adeh_2443
Response regulator receiver domain protein (CheY-like).
      
 0.618
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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