STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_1997Two component transcriptional regulator, LuxR family. (218 aa)    
Predicted Functional Partners:
Adeh_1998
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.975
Adeh_1763
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.908
Adeh_1999
Hypothetical protein.
       0.773
Adeh_2000
Peptidase M56, BlaR1.
       0.773
Adeh_2001
Deca-heme C-type cytochrome-like protein.
       0.773
Adeh_2002
Cytochrome c family protein.
       0.773
Adeh_4222
Signal transduction histidine kinase, nitrogen specific, NtrB.
   
 
 0.609
Adeh_3183
Signal transduction histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
   
 
 0.608
Adeh_4122
GAF sensor hybrid histidine kinase.
   
 
 0.462
Adeh_2090
GAF sensor signal transduction histidine kinase.
  
 
 0.419
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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