STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_2002Cytochrome c family protein. (346 aa)    
Predicted Functional Partners:
Adeh_2001
Deca-heme C-type cytochrome-like protein.
     0.994
Adeh_2000
Peptidase M56, BlaR1.
 
     0.799
Adeh_0796
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
 
 0.778
Adeh_1997
Two component transcriptional regulator, LuxR family.
       0.773
Adeh_1998
Periplasmic sensor signal transduction histidine kinase.
       0.773
Adeh_1999
Hypothetical protein.
       0.773
Adeh_1659
Cytochrome c family protein.
 
   
 0.747
Adeh_2007
4Fe-4S ferredoxin, iron-sulfur binding protein.
 
 
 0.675
Adeh_3088
Polysulphide reductase, NrfD.
  
     0.669
Adeh_0480
Fe-S-cluster-containing hydrogenase components 1.
 
 
 0.665
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.