Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Adeh_2009Two component, sigma54 specific, transcriptional regulator, Fis family. (463 aa)    
Predicted Functional Partners:
Adeh_2010
Peptidase predicted, zinc-dependent.
       0.773
Adeh_2011
Periplasmic sensor signal transduction histidine kinase.
 
   0.734
Adeh_4167
RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.697
Adeh_0705
Type III secretion system apparatus protein YscQ/HrcQ.
  
  
 0.642
Adeh_3183
Signal transduction histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.481
Adeh_3728
Signal transduction histidine kinase, nitrogen specific, NtrB.
 
 
 0.465
Adeh_0107
Periplasmic sensor signal transduction histidine kinase.
  
   0.449
Adeh_4249
Histidine kinase.
 
 
 0.438
Adeh_0923
Multi-sensor signal transduction histidine kinase.
  
   0.430
Adeh_1907
Signal transduction histidine kinase, nitrogen specific, NtrB.
 
 
 0.425
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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