STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_21403-hydroxybutyrate dehydrogenase. (261 aa)    
Predicted Functional Partners:
Adeh_2363
butyryl-CoA:acetate CoA transferase.
 0.932
Adeh_2364
3-oxoacid CoA-transferase, subunit A.
 
 0.931
Adeh_3217
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    
0.923
Adeh_1644
hydroxymethylglutaryl-CoA lyase.
   
 
 0.903
Adeh_2138
Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
       0.773
Adeh_2139
Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
       0.773
Adeh_2137
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.
   
   0.622
Adeh_2410
Hypothetical protein.
   
 
 0.561
Adeh_2749
[Acyl-carrier-protein] S-malonyltransferase.
 
 
 0.542
Adeh_2135
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-.
       0.538
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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