Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_2161Hypothetical protein. (295 aa)    
Predicted Functional Partners:
Adeh_3690
Hypothetical protein.
  
     0.653
Adeh_0459
Transposase.
  
     0.644
Adeh_1036
Hypothetical protein.
  
     0.632
Adeh_3048
Putative GAF sensor protein.
  
     0.630
Adeh_2250
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.532
Adeh_2159
Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.520
Adeh_2160
Conserved hypothetical protein.
       0.520
Adeh_4018
HNH endonuclease.
  
     0.484
Adeh_0044
GCN5-related N-acetyltransferase.
  
     0.449
Adeh_4042
HNH endonuclease.
  
     0.435
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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