Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Adeh_2183Protein of unknown function DUF6, transmembrane. (314 aa)    
Predicted Functional Partners:
Adeh_2182
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.
       0.773
Adeh_2181
Branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
       0.750
Adeh_2180
Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
       0.711
Adeh_0052
Protein of unknown function DUF6, transmembrane.
  
     0.597
Adeh_2184
Protein of unknown function DUF28.
       0.492
Adeh_2179
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.
       0.460
Adeh_2038
Conserved hypothetical protein.
  
     0.437
Adeh_0308
Conserved hypothetical protein.
  
  
 0.428
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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