STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_2201Thioredoxin; Belongs to the thioredoxin family. (109 aa)    
Predicted Functional Partners:
Adeh_3951
Thioredoxin reductase.
 
 0.912
Adeh_2202
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
     
 0.612
Adeh_2203
Protein of unknown function DUF6, transmembrane.
     
 0.584
Adeh_1564
Ferric uptake regulator, Fur family; Belongs to the Fur family.
  
 
 0.576
fur
Ferric uptake regulator, Fur family; Belongs to the Fur family.
  
 
 0.576
hslU
Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
  
 
 0.551
hslV
ATP dependent peptidase CodWX, CodW component, Threonine peptidase, MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
  
  
 0.542
Adeh_2200
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.523
Adeh_2206
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.521
Adeh_1291
Chaperone DnaJ-like protein.
 
 
 0.520
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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