STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_22114-oxalocrotonate tautomerase. (127 aa)    
Predicted Functional Partners:
Adeh_2209
ABC-type nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein.
       0.645
Adeh_2210
Periplasmic sensor hybrid histidine kinase.
       0.645
Adeh_0023
Transcriptional regulator, XRE family.
  
     0.620
Adeh_0548
Alpha/beta hydrolase fold-1.
 
   
 0.436
Adeh_2207
Protein of unknown function DUF323.
       0.430
Adeh_2208
Glycosyl transferase, group 1.
       0.422
Adeh_1014
NmrA-like protein.
 
   
 0.405
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.