Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Adeh_2275 | Adeh_2277 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c, class I. | 0.966 |
Adeh_2275 | Adeh_2278 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Beta-lactamase-like protein. | 0.578 |
Adeh_2275 | Adeh_2279 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family. | 0.613 |
Adeh_2275 | Adeh_2280 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Monoheme cytochrome SoxX (sulfur oxidation). | 0.946 |
Adeh_2275 | Adeh_2281 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Diheme cytochrome SoxA (sulfur oxidation). | 0.767 |
Adeh_2275 | Adeh_2282 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Conserved hypothetical protein. | 0.467 |
Adeh_2275 | Adeh_2283 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Sulfur compound chelating protein SoxZ. | 0.455 |
Adeh_2275 | Adeh_2284 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Thiosulfate-binding protein SoxY. | 0.468 |
Adeh_2275 | Adeh_2285 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Sulfur dehydrogenase subunit SoxD. | 0.731 |
Adeh_2275 | Adeh_2286 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Sulfur dehydrogenase subunit SoxC. | 0.629 |
Adeh_2277 | Adeh_2275 | Cytochrome c, class I. | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.966 |
Adeh_2277 | Adeh_2278 | Cytochrome c, class I. | Beta-lactamase-like protein. | 0.598 |
Adeh_2277 | Adeh_2279 | Cytochrome c, class I. | Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family. | 0.624 |
Adeh_2277 | Adeh_2280 | Cytochrome c, class I. | Monoheme cytochrome SoxX (sulfur oxidation). | 0.565 |
Adeh_2277 | Adeh_2281 | Cytochrome c, class I. | Diheme cytochrome SoxA (sulfur oxidation). | 0.706 |
Adeh_2277 | Adeh_2282 | Cytochrome c, class I. | Conserved hypothetical protein. | 0.493 |
Adeh_2277 | Adeh_2285 | Cytochrome c, class I. | Sulfur dehydrogenase subunit SoxD. | 0.626 |
Adeh_2277 | Adeh_2286 | Cytochrome c, class I. | Sulfur dehydrogenase subunit SoxC. | 0.490 |
Adeh_2278 | Adeh_2275 | Beta-lactamase-like protein. | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.578 |
Adeh_2278 | Adeh_2277 | Beta-lactamase-like protein. | Cytochrome c, class I. | 0.598 |
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