STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_2458Glycosyl transferase, family 2. (774 aa)    
Predicted Functional Partners:
Adeh_2455
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.911
Adeh_4301
Glycosyl transferase, family 2.
 
    0.785
Adeh_2647
Sugar transferase.
 
  
 0.753
Adeh_2461
ABC transporter, ATPase subunit.
 
 
 0.702
Adeh_4289
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.697
Adeh_1165
Long-chain-fatty-acid CoA ligase.
  
 
 0.689
Adeh_4299
NAD-dependent epimerase/dehydratase.
 
  
 0.673
Adeh_2766
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.667
Adeh_4288
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.666
Adeh_2462
ABC transporter, inner membrane subunit.
 
  
 0.661
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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