STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_3136Protein of unknown function DUF140. (386 aa)    
Predicted Functional Partners:
Adeh_1862
ABC transporter, ATPase subunit.
 
 0.997
Adeh_3138
Mammalian cell entry related protein.
 
 0.994
Adeh_3137
ABC transporter, ATPase subunit.
 
  
 0.989
Adeh_1861
Conserved hypothetical protein.
 
 0.984
Adeh_1863
ABC amino acid transporter, inner membrane subunit.
  
  
 
0.920
Adeh_3139
Protein of unknown function DUF330.
 
     0.803
bamA
Surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
     0.592
Adeh_2465
Permease YjgP/YjgQ.
 
  
 0.576
Adeh_0204
Hypothetical protein.
   
 
 0.572
Adeh_2659
Hypothetical protein.
   
 
 0.572
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.