STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_3333Tetratricopeptide repeat protein. (274 aa)    
Predicted Functional Partners:
Adeh_1956
Tetratricopeptide repeat protein.
  
     0.761
Adeh_0137
Hypothetical protein.
 
     0.760
Adeh_0888
Tetratricopeptide repeat protein.
 
     0.741
Adeh_1266
Tetratricopeptide repeat protein.
 
     0.731
Adeh_2980
Tetratricopeptide repeat protein.
 
     0.692
Adeh_3564
Conserved hypothetical protein.
 
     0.626
Adeh_3966
LigA.
  
     0.607
Adeh_3311
Tetratricopeptide repeat protein.
 
     0.588
Adeh_1690
Hypothetical protein.
  
     0.558
Adeh_3334
Sigma54 specific transcriptional regulator with PAS sensor, Fis family.
       0.547
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.