STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_3386Peptidase M23B. (318 aa)    
Predicted Functional Partners:
Adeh_0057
Penicillin-binding protein 1A.
  
   
 0.660
Adeh_3339
Penicillin-binding protein 1A.
  
   
 0.635
mtgA
Glycosyl transferase, family 51; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
   
 0.622
Adeh_0705
Type III secretion system apparatus protein YscQ/HrcQ.
   
 
 0.604
Adeh_1238
Glycosyl transferase, family 51; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.
  
   
 0.562
Adeh_3385
ABC transporter, ATPase subunit.
       0.542
Adeh_4158
Signal peptidase I, Serine peptidase, MEROPS family S26A; Belongs to the peptidase S26 family.
 
  
 0.460
Adeh_0667
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.450
Adeh_1615
Signal peptidase I, Serine peptidase, MEROPS family S26A; Belongs to the peptidase S26 family.
 
  
 0.444
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
 
   
 0.407
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.