STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_3389Histone deacetylase superfamily. (594 aa)    
Predicted Functional Partners:
Adeh_3450
Serine/threonine protein kinase with WD40 repeats.
    
 0.795
Adeh_3388
Hypothetical protein.
       0.732
Adeh_2524
SNF2-related Helicase-like protein.
  
 
 0.674
Adeh_3723
Cyclic nucleotide-binding domain (cNMP-BD) protein.
   
 0.673
Adeh_0567
RNA polymerase associated protein rapA.
  
 
 0.672
Adeh_0291
AAA ATPase.
   
 0.666
Adeh_1285
AAA ATPase.
   
 0.666
Adeh_3387
Inositol-1(or 4)-monophosphatase.
  
  
 0.553
Adeh_0194
Conserved hypothetical protein.
    
 0.525
Adeh_2053
Methyltransferase type 11.
    
 0.525
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.