STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_3394Beta-lactamase. (394 aa)    
Predicted Functional Partners:
Adeh_2411
Uncharacterized conserved protein UCP016719.
  
 0.983
Adeh_4264
Glycoside hydrolase, family 3-like protein.
  
 0.967
Adeh_3807
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
 
  
 0.939
Adeh_3395
Peptidase S66, LD-carboxypeptidase A.
 
     0.914
Adeh_1252
Sugar phosphate isomerase-like protein.
  
 0.903
Adeh_3393
UDP-N-acetylmuramate--L-alanine ligase.
 
   
 0.736
Adeh_0528
Aspartate racemase.
 
  
 0.431
Adeh_3789
Peptidoglycan-binding lytic transglycosylase.
 
   
 0.419
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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