STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_3600P pilus assembly protein chaperone PapD-like protein. (250 aa)    
Predicted Functional Partners:
Adeh_3599
Fimbrial biogenesis outer membrane usher protein.
 
 
 0.996
Adeh_3601
Spore coat U.
 
 
 0.953
Adeh_3602
Spore coat U.
 
 
 0.931
Adeh_3598
Hypothetical protein.
       0.773
Adeh_3377
Aspartyl/Asparaginyl beta-hydroxylase.
  
     0.645
Adeh_1877
Hypothetical protein.
   
  
 0.479
Adeh_2900
Conserved hypothetical protein.
   
  
 0.479
Adeh_0608
Hypothetical protein.
   
    0.455
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.