Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Adeh_2900 | Adeh_3953 | Conserved hypothetical protein. | TatD-related deoxyribonuclease. | 0.423 |
Adeh_3953 | Adeh_2900 | TatD-related deoxyribonuclease. | Conserved hypothetical protein. | 0.423 |
Adeh_3953 | Adeh_3954 | TatD-related deoxyribonuclease. | MCP methyltransferase, CheR-type. | 0.610 |
Adeh_3953 | Adeh_3955 | TatD-related deoxyribonuclease. | CheW protein. | 0.657 |
Adeh_3953 | Adeh_3966 | TatD-related deoxyribonuclease. | LigA. | 0.509 |
Adeh_3953 | Adeh_4207 | TatD-related deoxyribonuclease. | Hypothetical protein. | 0.464 |
Adeh_3954 | Adeh_3953 | MCP methyltransferase, CheR-type. | TatD-related deoxyribonuclease. | 0.610 |
Adeh_3954 | Adeh_3955 | MCP methyltransferase, CheR-type. | CheW protein. | 0.903 |
Adeh_3955 | Adeh_3953 | CheW protein. | TatD-related deoxyribonuclease. | 0.657 |
Adeh_3955 | Adeh_3954 | CheW protein. | MCP methyltransferase, CheR-type. | 0.903 |
Adeh_3966 | Adeh_3953 | LigA. | TatD-related deoxyribonuclease. | 0.509 |
Adeh_4207 | Adeh_3953 | Hypothetical protein. | TatD-related deoxyribonuclease. | 0.464 |