STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_4050Glycosyl transferase, family 25. (283 aa)    
Predicted Functional Partners:
Adeh_4049
DsbA oxidoreductase.
       0.777
Adeh_1562
DNA-binding protein Fis / transcriptional regulator, Fis family.
  
     0.679
Adeh_4028
Conserved hypothetical protein.
  
     0.673
Adeh_3237
Hypothetical protein.
  
     0.665
Adeh_3982
Hypothetical protein.
  
     0.636
Adeh_1015
Thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family.
  
     0.633
Adeh_0991
Hypothetical protein.
  
     0.561
panD
L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
       0.536
Adeh_0896
Glycosyltransferase; Probably involved in cell wall biogenesis.
 
  
 0.534
Adeh_3639
LigA.
  
     0.516
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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