STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_4163Methyl-viologen-reducing hydrogenase, delta subunit. (491 aa)    
Predicted Functional Partners:
Adeh_4162
Nickel-dependent hydrogenase, large subunit.
 
 0.999
Adeh_4164
CoB--CoM heterodisulfide reductase subunit A.
 0.999
Adeh_0478
Nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.958
Adeh_2791
Glutamate synthase (NADPH), homotetrameric.
  
 
 0.929
Adeh_4161
Peptidase M52, hydrogen uptake protein.
 
  
 0.915
Adeh_2478
Ferredoxin / FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 
 0.846
Adeh_0748
FAD/NAD(P)-binding oxidoreductase.
 
 
 0.818
Adeh_4200
NADH dehydrogenase subunit E.
   
 
 0.738
Adeh_4199
NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 
 0.732
Adeh_0474
Hydrogenase formation HypD protein; Belongs to the HypD family.
 
   
 0.664
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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