Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Adeh_4172 | Adeh_4176 | Adeh_4172 | Adeh_4176 | Phosphatase kdsC. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.533 |
Adeh_4172 | Adeh_4177 | Adeh_4172 | Adeh_4177 | Phosphatase kdsC. | Pseudouridine synthase, RluD; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.407 |
Adeh_4172 | Adeh_4178 | Adeh_4172 | Adeh_4178 | Phosphatase kdsC. | Hypothetical protein. | 0.407 |
Adeh_4172 | kdsA | Adeh_4172 | Adeh_4173 | Phosphatase kdsC. | 2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family. | 0.998 |
Adeh_4172 | kdsB | Adeh_4172 | Adeh_4175 | Phosphatase kdsC. | 3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | 0.998 |
Adeh_4172 | pyrG | Adeh_4172 | Adeh_4174 | Phosphatase kdsC. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.803 |
Adeh_4176 | Adeh_4172 | Adeh_4176 | Adeh_4172 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Phosphatase kdsC. | 0.533 |
Adeh_4176 | Adeh_4177 | Adeh_4176 | Adeh_4177 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Pseudouridine synthase, RluD; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.619 |
Adeh_4176 | Adeh_4178 | Adeh_4176 | Adeh_4178 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Hypothetical protein. | 0.603 |
Adeh_4176 | kdsA | Adeh_4176 | Adeh_4173 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family. | 0.520 |
Adeh_4176 | kdsB | Adeh_4176 | Adeh_4175 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | 0.548 |
Adeh_4176 | pyrG | Adeh_4176 | Adeh_4174 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.520 |
Adeh_4177 | Adeh_4172 | Adeh_4177 | Adeh_4172 | Pseudouridine synthase, RluD; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Phosphatase kdsC. | 0.407 |
Adeh_4177 | Adeh_4176 | Adeh_4177 | Adeh_4176 | Pseudouridine synthase, RluD; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.619 |
Adeh_4177 | Adeh_4178 | Adeh_4177 | Adeh_4178 | Pseudouridine synthase, RluD; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Hypothetical protein. | 0.773 |
Adeh_4177 | kdsA | Adeh_4177 | Adeh_4173 | Pseudouridine synthase, RluD; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family. | 0.509 |
Adeh_4177 | kdsB | Adeh_4177 | Adeh_4175 | Pseudouridine synthase, RluD; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | 0.435 |
Adeh_4177 | pyrG | Adeh_4177 | Adeh_4174 | Pseudouridine synthase, RluD; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.478 |
Adeh_4178 | Adeh_4172 | Adeh_4178 | Adeh_4172 | Hypothetical protein. | Phosphatase kdsC. | 0.407 |
Adeh_4178 | Adeh_4176 | Adeh_4178 | Adeh_4176 | Hypothetical protein. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.603 |
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