STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeh_4193Outer membrane protein, OmpA/MotB family. (248 aa)    
Predicted Functional Partners:
tolB
TolB-like protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.639
pal
Outer membrane protein, OmpA/MotB family; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
     0.527
Adeh_4192
DNA translocase FtsK.
  
  
 0.522
Adeh_1384
Outer membrane protein, OmpA/MotB family.
  
 
0.505
rpsF
SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.
  
   0.486
Adeh_1082
Outer membrane chaperone Skp (OmpH).
  
 
 0.469
Adeh_0224
Endonuclease/exonuclease/phosphatase.
  
  
 0.466
Adeh_0218
Pyruvate-ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.457
Adeh_3789
Peptidoglycan-binding lytic transglycosylase.
  
 
 0.426
rpsZ
SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
   
 
 0.425
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.