Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Adeh_4239Conserved hypothetical protein. (175 aa)    
Predicted Functional Partners:
Adeh_4240
Two component, sigma54 specific, transcriptional regulator, Fis family.
   
   0.781
Adeh_0737
Hypothetical protein.
  
     0.590
Adeh_1366
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.522
Adeh_1384
Outer membrane protein, OmpA/MotB family.
    
   0.522
Adeh_1393
Flagellar motor switch protein FliG.
    
   0.522
ftsH-3
Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.499
Adeh_4238
Hypothetical protein.
       0.495
Adeh_4216
Superfamily I DNA and RNA helicase.
  
     0.456
Adeh_2453
Uncharacterized conserved protein UCP033563.
  
     0.439
Adeh_0871
Radical SAM.
 
     0.426
Your Current Organism:
Anaeromyxobacter dehalogenans
NCBI taxonomy Id: 290397
Other names: A. dehalogenans 2CP-C, Anaeromyxobacter dehalogenans 2CP-C, Anaeromyxobacter dehalogenans ATCC BAA-259, Anaeromyxobacter dehalogenans str. 2CP-C, Anaeromyxobacter dehalogenans strain 2CP-C
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