STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_0010Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase. (489 aa)    
Predicted Functional Partners:
Csal_2031
Hypothetical protein.
  
     0.754
Csal_1209
Transcriptional regulator, XRE family.
  
     0.704
Csal_0673
Hypothetical protein.
  
     0.682
Csal_1144
Sugar (Glycoside-Pentoside-Hexuronide) transporter.
      
 0.673
Csal_0240
Polysaccharide deacetylase.
  
     0.632
Csal_0500
Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.608
Csal_1728
Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.608
Csal_0118
VanZ like protein.
  
    0.591
Csal_1980
Anti-sigma-28 factor, FlgM.
  
     0.588
Csal_2061
Glycerophosphoryl diester phosphodiesterase.
 
   
 0.551
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.