Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Csal_0331Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (417 aa)    
Predicted Functional Partners:
Csal_0329
4-carboxy-4-hydroxy-2-oxoadipate aldolase.
 
     0.856
Csal_0330
LmbE-like protein.
 
     0.831
Csal_0324
Protocatechuate 4,5-dioxygenase beta subunit.
 
     0.830
Csal_0328
Methylitaconate delta2-delta3-isomerase.
 
     0.830
Csal_0325
Protocatechuate 4,5-dioxygenase alpha subunit.
 
     0.824
Csal_0323
Protocatechuate 4,5-dioxygenase alpha subunit / protocatechuate 4,5-dioxygenase beta subunit.
 
     0.820
Csal_0333
Hypothetical protein.
 
     0.763
Csal_1417
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.705
Csal_1027
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.686
Csal_0659
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.630
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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