STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csal_0359Alcohol dehydrogenase GroES-like protein. (366 aa)    
Predicted Functional Partners:
Csal_0358
Transcriptional regulator, DeoR family.
 
   
 0.640
Csal_0360
Conserved hypothetical protein.
 
     0.639
xylB
Xylulokinase.
 
 
 0.632
Csal_0361
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; TC 3.A.1.2.-.
  
    0.560
Csal_2648
PTS system D-fructose-specific IIA component (F1P-forming), Frc family / Phosphocarrier protein HPr; TC 4.A.2.1.1; Belongs to the PEP-utilizing enzyme family.
     
 0.550
Csal_0363
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-.
 
    0.535
Csal_0362
Monosaccharide ABC transporter membrane protein, CUT2 family; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
  
    0.498
Csal_0836
Alcohol dehydrogenase GroES-like protein.
 
   0.444
Your Current Organism:
Chromohalobacter salexigens
NCBI taxonomy Id: 290398
Other names: C. salexigens DSM 3043, Chromohalobacter salexigens 1H11, Chromohalobacter salexigens DSM 3043
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